Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015806933.1_cds_XP_016494619.1_9011
CDS Infomation

[gene=LOC107813826] [db_xref=GeneID:107813826] [protein=protein SDE2 homolog] [protein_id=XP_016494619.1] [location=join(46598..47265,48320..48890,50158..50304)] [gbkey=CDS]
Sequence

ATGGAGATGAAGGAAGGGTCTGTAATTCATCAAGTCCTCGTTAAACTTCTCGATGGGAAG
CACAAAACCCTAAATTTCAGTACCTCATCCATCTCGACCCTAACCCTAAAGCAGAAAATC
CAAGCCCTAACTTCAATCCCTTGTCACCTTCAGCTCCTACTCCTTTCCAATTCATTCTAC
CCCCTACATGACGACCTCCAAACTCTAAATCTCTCAAACAGGTCTAATTTTCCGGTGGTG
GTGAATTTGTTGGTGCGGCTGAGGGGCGGTAAAGGAGGATTCGGGTCATTGCTGAGAGGA
GCGGCGACGAAGGCAGGGCAGAAGAAGACAAATAATTTCGACGCTTGCAGGGACATGAGT
GGACGAAGGCTAAGGCATGTGAATGCGGAGAAGAAGCTGGAAGAGTGGAGGGCTGAAGCG
GAGGAGAGGAAGTTGGAGAAGATGGCGGAGGAGTTCCTTAAGAAGAATGCCAAAGAAGCG
GCAAAAAAGGGTAATAAGAGTGGAGATAGTAACACGGATAAGTATGTGCAGAAGTATAGG
GATGATTCTGCTAAGTGTATGGAGGAAGTAGAGAGATCTGTTAGGGAATCGCTTAAGGGG
TTTGTGTCATCTAAAAGAAAAGGTGCTGCTGAGCTCAATGAATCTGATCCCAAGAAGCTC
AAGATATGGTTGGGTAAGAGGATAATGGGTGACAGTGATAGCGAGGATCTAGATGATGAT
GACAGTGAGGAAGACGAGGAAGAGAATGACAAATCCATTGTCATCGATAATGGGAATAAT
TCAGACTCCAATGGAGAAGCAGAGGGAAGTTTGGATTCTGTGACTGGCAGGAAAGTTGAT
GGTGTTACATCTGAGAGCGGCTCCGAGGAAGAAAAGGATACTCTGAAGAATCTTGAATTT
GGTAATGATGTCAACGTAGTTTCAGTTCAGCATGAAGGTGAAAGTCCCTCCACACTCACT
CCAGACAATCAAGAAAAACCTGGACAGAATTGTGTTGCCTCTATTGTTGGTACTGATATT
GCATCTGCAACTGAAAGTATTCAAACAGGAAAGGAAGTTTCTGGTAGTTCTGAGCCAATT
GTAGTGGAAGCTAGCTCTGGTGAGAAAGAAAATGATGTTGCTGAAGCCAGCGGTAGTTTA
AGCCCTAAACCAGTTCCTCTGGAAGATGCAACCTCAAAGGATTCAGACTTGAACAAGCCT
TTCAATTTTGAGGAATTTAGTTCAGCATCAGAACTGGAGGCCCTCGGTATGGAGAGGTTA
AAATCAGAACTTCAAGTGCGTGGGTTGAAGTGTGGGGGCACTCTGCAAGAACGTGCAGCC
AGGCTTTTCCTACTCAAAACCACACCTTTGGAGATGCTTCCAAAGAAGTTGCTCGCTAAG
AAATAA

Peptide Sequence

PEP ID

XP_016494619.1
PEP Infomation

PREDICTED: protein SDE2 homolog [Nicotiana tabacum]
Sequence

MEMKEGSVIHQVLVKLLDGKHKTLNFSTSSISTLTLKQKIQALTSIPCHLQLLLLSNSFY
PLHDDLQTLNLSNRSNFPVVVNLLVRLRGGKGGFGSLLRGAATKAGQKKTNNFDACRDMS
GRRLRHVNAEKKLEEWRAEAEERKLEKMAEEFLKKNAKEAAKKGNKSGDSNTDKYVQKYR
DDSAKCMEEVERSVRESLKGFVSSKRKGAAELNESDPKKLKIWLGKRIMGDSDSEDLDDD
DSEEDEEENDKSIVIDNGNNSDSNGEAEGSLDSVTGRKVDGVTSESGSEEEKDTLKNLEF
GNDVNVVSVQHEGESPSTLTPDNQEKPGQNCVASIVGTDIASATESIQTGKEVSGSSEPI
VVEASSGEKENDVAEASGSLSPKPVPLEDATSKDSDLNKPFNFEEFSSASELEALGMERL
KSELQVRGLKCGGTLQERAARLFLLKTTPLEMLPKKLLAKK

Transcript Sequence

Gene sequence data has not been registered.